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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886829.1_cds_XP_016441002.1_36387
CDS Infomation

[gene=LOC107766687] [db_xref=GeneID:107766687] [protein=serine/threonine-protein phosphatase 4 regulatory subunit 3-like] [protein_id=XP_016441002.1] [location=join(2737..2750,2978..3027,3342..3427,3529..3597,3678..3755,3835..3930,12574..12644,12997..13074,13203..13296,13851..13946,14433..14650,14741..14855,16376..16507,16602..16709,16792..16904,16971..17072,17150..17645)] [gbkey=CDS]
Sequence

ATGGAGTGGGTCAGATATGCTGCTAATCCTCTTGTTTCGGGATTTGGCCTTGCTTTCTTT
TCTGGATGCATATTTTGGTCAACAGATGATCCAGATGCTCCTCATGTTCATCATCGCAAT
TTTCTGAAAGAGCATGTGGTCTTTAAGGAGGCTATAGCTATTAAAGATCCATTAGTCCTT
TCAAAGATACATCAAACATACCGAGTTGGCTATCTGAAGGATGTCATTTTGCCTCGAATG
TTGGATGACGCAACAGTTGCAAACCTTAATTCCATAATCCATGCAAACAATGCAGTTGTT
GTATCTCTCTTAAAAGATGATAGCACCTTCATTCAGGATTTGTTTGGAAAGTTGAAGTCG
CCTTCCACATCTGCAGAGTCAAAGAAAAATTTGGTGCACTTCTTGCATGAGTTTTGTACT
TTGAGTAAGAGCTTGCAAGTGGTCCAGCAACATCGGCTATTTAGGGATCTTGTTAATGAA
GGCATATTCGATATCATAGCTGATGTTTTGCAGAGCCAAGACAAAAAGCTAGTCCTGATG
GGGACAGACATCCTCATTCTATTCTTAAATCAAGATTCAAATCTTCTGCGATCTTATGTA
ATTCGTCAGGAAGGCCTTGCTTTGTTTGGACTTCTGGTCAAAGGTATGCTAACAGATTTT
GGGGATGAAATGCACTGCCAGTTTCTTGAAATTCTGCGCAGTCTCATGGATTCATATGCA
TCAGGAACCCAGAGAGAGGCCATTGTTGAAATTTTCTACGAGAAGCACCTAAGTCAACTC
ATTGATGCTATAACATCATCCTGCCCGGCAGACGGTGCTGCAGAAACTGTCCGTAACTCG
GAGTGCTCTGATGGAGGAACTGAAAAGCAAAGCAGCGTCAAGCCTGAAATACTACTAAAT
ATCTGTGATCTCCTATGTTTTTGTATTGTGCACCATCCTTATAGAATAAAGTGCAACTTT
CTTCTAAATAATGTGATAGATAAAGTTCTCTTTCTGACACGAAGAAAAGAAAAGTACCTG
GTAGTTGCCGCTGTTAGATTTATGAGAACTCTTATTTCGCGCAATGATGAGCATTTGATG
AATTACATAGCGAAGCACAATCTCTTAAAACCAGTGGTTGATGCTTTTGTTGCTAATGGA
GACCGCTACAATCTGCTAAACTCAGCTGTTCTTGAGCTTTTTGAGCATATTCGTAAGGAT
AACTTGAAGATATTGCTCAAGTATTTAGTGGACTCATTCTGGGATGAACTGGTCAAGTTT
GAAAAGTTGACATCTATTCACTCTTTGAAAATTAAATATGAGCAGTCCCTAGATTGTTCA
GGAACCAGAAGTGTTGGCGATCTGTTAGACGACCCTAGGAAAAGAGTTAATGAGCGTGGT
TTAGAGAAAGAAGAAGAAGAATATTTCAATGAAGACAGTGATGAAGAAGATTCTGCGTTT
GCCTCTGTGGCCAACGCAAGTAGAGCGCAGGCTCAGCCGGCCTTGCCTAATGGGTCTGCT
CCAAGCCCCTCATCTGTGAGATCTGGAGGACTTGTTGATTATGATGACGACGAGGATGAT
GAAGATTATAAGCCACCACCTAGGAAGCAATCTAATAATTCTGATGAAGATGCGGAGTCT
TTTCCGTTGAAACGAAAGCTATCTCCGAAAGAAGAGCCTGAGCCAAAAAGGTTGCAGCGG
ATTGCTAAAGGCTCAAAGTCTCGAGACGGTGTTTTCGCTGCTTTGTGCTCAACCTTAAGT
CAAGCAGTTTTGCCCTCTAAAAAGACAGTAAGTACAGCACAAGATGGTCCATGCTCAGAT
GGAGACAAGAAATCTGTGGAGTCCAACCATGAGGAGAAAGGGAATTCTACTGATAATGGG
AGTGCTGATTTGGATACTCATGACGACCAAGAACCAACTTGTCCTAAAAGTTTTTCTGAA
AGCATGCACAGTTCTCCAGATGATAGGCAGAGGGGAGATGATTATCCGTTAATACCGCCA
AAATCATCTCCTGAAATGGCTGTAAATGGATCATAA

Peptide Sequence

PEP ID

XP_016441002.1
PEP Infomation

PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like [Nicotiana tabacum]
Sequence

MEWVRYAANPLVSGFGLAFFSGCIFWSTDDPDAPHVHHRNFLKEHVVFKEAIAIKDPLVL
SKIHQTYRVGYLKDVILPRMLDDATVANLNSIIHANNAVVVSLLKDDSTFIQDLFGKLKS
PSTSAESKKNLVHFLHEFCTLSKSLQVVQQHRLFRDLVNEGIFDIIADVLQSQDKKLVLM
GTDILILFLNQDSNLLRSYVIRQEGLALFGLLVKGMLTDFGDEMHCQFLEILRSLMDSYA
SGTQREAIVEIFYEKHLSQLIDAITSSCPADGAAETVRNSECSDGGTEKQSSVKPEILLN
ICDLLCFCIVHHPYRIKCNFLLNNVIDKVLFLTRRKEKYLVVAAVRFMRTLISRNDEHLM
NYIAKHNLLKPVVDAFVANGDRYNLLNSAVLELFEHIRKDNLKILLKYLVDSFWDELVKF
EKLTSIHSLKIKYEQSLDCSGTRSVGDLLDDPRKRVNERGLEKEEEEYFNEDSDEEDSAF
ASVANASRAQAQPALPNGSAPSPSSVRSGGLVDYDDDEDDEDYKPPPRKQSNNSDEDAES
FPLKRKLSPKEEPEPKRLQRIAKGSKSRDGVFAALCSTLSQAVLPSKKTVSTAQDGPCSD
GDKKSVESNHEEKGNSTDNGSADLDTHDDQEPTCPKSFSESMHSSPDDRQRGDDYPLIPP
KSSPEMAVNGS

Transcript Sequence

Gene sequence data has not been registered.